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Intron Name: Anas_platyrhynchos_platyrhynchos_4_6891595_6898259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6891595 - 6898259

Intron Length:

6665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CTGCTCATACAT

Flanking Amino Acid:

NGLIGELVFKRADIGISALT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

84.8

28.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

85.1

0.79

0.7

84.2

23.8

Minor 5ss

40.3

-1.1

3.3

55.3

48.9

Minor BPS

43.4

-0.4

1.9

58.93

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005363

6890404 - 7018067

127664

ENSAPLT00000044192

6801207 - 7018067

216861