Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_68927726_68927889_F

Intron Information:

Intron Rank:

147370

Intron Class:

major

Intron Phase:

Intron Coordinates:

68927726 - 68927889

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGAAA

5'SS Class:

major

3'SS Sequence:

ATGTATGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTCCAATTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.2

38.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

73.9

0.54

Minor 5ss

29.5

-2.3

3.4

38.5

46.8

Minor BPS

0.11

1.9

73.48

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025849

68927696 - 68929898

2203