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Intron Name: Anas_platyrhynchos_platyrhynchos_4_6898573_6920973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6898573 - 6920973

Intron Length:

22401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CAAATTAAAACT

Flanking Amino Acid:

WFVYGSFVQQGGEVPYTTLA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

81.9

0.72

0.7

76.6

25.6

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

42.7

-0.4

1.8

54.92

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044192

6801207 - 7018067

216861

ENSAPLT00000005363

6890404 - 7018067

127664