Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_69287400_69288411_R

Intron Information:

Intron Rank:

137575

Intron Class:

major

Intron Phase:

Intron Coordinates:

69287400 - 69288411

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

CCATTGCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTATCCTTACAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

69.9

41.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

74.8

0.56

0.9

65.1

Minor 5ss

38.5

-1.3

3.6

53.6

44.8

Minor BPS

59.9

0.29

1.8

68.43

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028296

69287216 - 69304465

17250

ENSAPLT00000036929

69283559 - 69288553

4995