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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69333372_69343543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69333372 - 69343543

Intron Length:

10172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

TGGTGCCTAACT

Flanking Amino Acid:

AGAGAAVIAMVHYLMVLSAN

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

82.2

0.73

0.8

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

55.8

0.26

2.1

77.54

44.5

Associated Gene:

Gene:

GPM6A

Ensembl Gene ID:

ENSAPLG00000002472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038039

69333219 - 69379959

46741

ENSAPLT00000024685

69333219 - 69486647

153429

ENSAPLT00000002517

69333219 - 69457369

124151