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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69346586_69357034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69346586 - 69357034

Intron Length:

10449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTACCACTAGTT

Flanking Amino Acid:

TTCGRCVSAWFIMLTYIFML

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

92.2

0.95

0.6

88.3

21.3

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

45.7

-0.2

2.1

68.93

41.4

Associated Gene:

Gene:

GPM6A

Ensembl Gene ID:

ENSAPLG00000002472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021886

69331659 - 69439700

108042

ENSAPLT00000002517

69333219 - 69457369

124151

ENSAPLT00000038039

69333219 - 69379959

46741

ENSAPLT00000024685

69333219 - 69486647

153429