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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69584166_69586589_F


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
69584166 - 69586589

Intron Length:
2424

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
GTCTTCCTTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
TTATTCATTACT

Flanking Amino Acid:
LARKCMTVTTCSPSLGYRDL

Intron Amino Acid Position:
1022

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.3
0.83
0.9
79.9
32.8

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
79.8
0.67
0.8
77.6
31.2

Minor 5ss
36.3
-1.6
3
48
41.5

Minor BPS
58.8
0.36
1.9
81.67
39.3

Associated Gene:

Gene:
WDR17

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69544468 - 69594532
50065

69544433 - 69594532
50100