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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69584166_69587791_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
69584166 - 69587791

Intron Length:
3626

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
TGTGTTTGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATAACAA

U12 Branch Point Sequence:
CCATCAAGAATA

Flanking Amino Acid:
LARKCMTVTTWDLAADLLMM

Intron Amino Acid Position:
998

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.3
0.83
0.9
79.9
32.8

Major BPS
53
0.08
1
61.4
34.3

Major PPT
77.7
0.62
1
72.9
42.2

Minor 5ss
36.3
-1.6
3
48
41.5

Minor BPS
43.5
-0.4
1.9
51.29
40.1

Associated Gene:

Gene:
WDR17

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69543700 - 69594532
50833

69553518 - 69592141
38624