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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69587904_69588607_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
69587904 - 69588607

Intron Length:
704

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAATGA

5'SS Class:
major

3'SS Sequence:
CCTTGTTTTCTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CAATAAT

U12 Branch Point Sequence:
ATTACAATAATT

Flanking Amino Acid:
IAEINDLHEKCNLPDAEECM

Intron Amino Acid Position:
1067

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.5
0.51
1.1
62.2
39.2

Major BPS
67.7
0.44
1.1
67.9
34.4

Major PPT
80.2
0.68
0.8
72.6
37.6

Minor 5ss
35.6
-1.6
3.3
47.9
47.5

Minor BPS
54.7
0.23
1.9
77.9
37.8

Associated Gene:

Gene:
WDR17

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69553518 - 69592141
38624

69544468 - 69594532
50065

69544433 - 69594532
50100

69543700 - 69594532
50833