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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69602228_69602621_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

69602228 - 69602621

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGCT

5'SS Class:

major

3'SS Sequence:

CTGTCGCATAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TGTCGCATAAAG

Flanking Amino Acid:

KLSNWARLQRFFAKHNLSVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

66.5

39.1

Major BPS

71.4

0.53

67.3

39.3

Major PPT

57.2

0.16

1.1

56.1

38.4

Minor 5ss

-2.8

3.4

30.5

42.8

Minor BPS

45.7

-0.4

2.1

56.4

44.1

Associated Gene:

Gene:

SPATA4

Ensembl Gene ID:

ENSAPLG00000006032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006244

69596578 - 69602919

6342