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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69608189_69608325_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
69608189 - 69608325

Intron Length:
137

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
TTTGTACTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTGAC

U12 Branch Point Sequence:
TTTGTACTGACA

Flanking Amino Acid:
PSPTHEAASRGHSECLEVLI

Intron Amino Acid Position:
234

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.9
1.03
0.7
89.8
22.3

Major BPS
73.6
0.59
0.9
63.3
35.6

Major PPT
74.2
0.54
1
69.7
40.7

Minor 5ss
35.1
-1.7
3.1
48.5
47.2

Minor BPS
47.8
-0.1
2
67.87
38.3

Associated Gene:

Gene:
ASB5

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69605667 - 69633000
27334

69605176 - 69630767
25592