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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69608477_69610022_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
69608477 - 69610022

Intron Length:
1546

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGGGTG

5'SS Class:
major

3'SS Sequence:
TTATGTATTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAT

U12 Branch Point Sequence:
TTGTTCTTACCT

Flanking Amino Acid:
ARILLEAGANVNATTIDGVT

Intron Amino Acid Position:
184

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.7
0.65
1.1
69.9
40.7

Major BPS
87.7
0.94
0.8
77.7
36.7

Major PPT
75.1
0.57
0.9
67.2
43.5

Minor 5ss
35.3
-1.7
3.8
51
45.9

Minor BPS
72.7
0.79
1.6
87.1
39

Associated Gene:

Gene:
ASB5

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69605667 - 69633000
27334

69605176 - 69630767
25592