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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69610131_69611257_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
69610131 - 69611257

Intron Length:
1127

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAAGGCT

5'SS Class:
major

3'SS Sequence:
ATATCTTGTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TCATTCATATCT

Flanking Amino Acid:
LLSLKTLLSQGYNVDTLTID

Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.62
1
68.9
35.6

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
71.6
0.49
1
70.4
40.4

Minor 5ss
25.8
-2.8
3.5
38.5
46.7

Minor BPS
53
0.17
1.9
73.26
43.5

Associated Gene:

Gene:
ASB5

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69605667 - 69633000
27334

69605176 - 69630767
25592