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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69649787_69650247_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69649787 - 69650247

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATGT

Flanking Amino Acid:

YFFFDDGNGLKGNRNITLTL

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

82.8

0.74

0.9

76.8

37.3

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

55.3

0.24

1.9

73.43

43.8

Associated Gene:

Gene:

SPCS3

Ensembl Gene ID:

ENSAPLG00000005667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005855

69643120 - 69650380

7261