Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_69840093_69840648_F

Intron Information:

Intron Rank:

134205

Intron Class:

major

Intron Phase:

Intron Coordinates:

69840093 - 69840648

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTTT

5'SS Class:

major

3'SS Sequence:

CTCCTTGATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TGCTCCTTGATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

74.8

38.1

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

72.8

0.51

64.9

40.4

Minor 5ss

42.9

-0.8

3.4

63.6

48.1

Minor BPS

73.6

0.73

1.2

74.31

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025851

69839990 - 69843907

3918