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Intron Name: Anas_platyrhynchos_platyrhynchos_4_69986735_69989871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69986735 - 69989871

Intron Length:

3137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTTACATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GGGTTTTAAACT

Flanking Amino Acid:

FDSGLHPAVKCRKTGSPLYK

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

66.1

40.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.7

0.78

0.8

81.7

34.8

Minor 5ss

32.4

-2

3.4

39.3

44.5

Minor BPS

55.1

0.24

1.7

68.48

42.8

Associated Gene:

Gene:

NEIL3

Ensembl Gene ID:

ENSAPLG00000013305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005640

69978167 - 70002323

24157