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Intron Name: Anas_platyrhynchos_platyrhynchos_4_70000786_70002146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70000786 - 70002146

Intron Length:

1361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TATACTATAACT

Flanking Amino Acid:

PMETRCDYFQWADLHFPFCN

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

88.8

0.87

0.7

84.2

30.7

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

66.1

0.58

1.6

83.26

37.1

Associated Gene:

Gene:

NEIL3

Ensembl Gene ID:

ENSAPLG00000013305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013850

69978167 - 70002323

24157

ENSAPLT00000005640

69978167 - 70002323

24157