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Intron Name: Anas_platyrhynchos_platyrhynchos_4_70005298_70020462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70005298 - 70020462

Intron Length:

15165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTCCCTTAACA

Flanking Amino Acid:

VICANTTGSYAGCMQHKSLK

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

81.2

0.7

0.8

77.3

29.9

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

89.8

1.24

0.9

93.36

24.6

Associated Gene:

Gene:

AGA

Ensembl Gene ID:

ENSAPLG00000013364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013943

70002399 - 70032549

30151