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Intron Name: Anas_platyrhynchos_platyrhynchos_4_70020597_70022622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70020597 - 70022622

Intron Length:

2026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTCCT

5'SS Class:

major

3'SS Sequence:

TGTTTGCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGGAAT

U12 Branch Point Sequence:

TTTTGGTTGTTT

Flanking Amino Acid:

DGDIMMRFLPSYQAVEYMRM

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

69.2

41.2

Major BPS

47.7

-0.1

1.6

55.4

48.1

Major PPT

80.2

0.68

0.8

77.9

36.6

Minor 5ss

39.3

-1.2

2.7

44.5

Minor BPS

37.2

-0.9

3.9

74.24

43.6

Associated Gene:

Gene:

AGA

Ensembl Gene ID:

ENSAPLG00000013364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041560

70006951 - 70032549

25599

ENSAPLT00000025711

70019551 - 70032549

12999

ENSAPLT00000013943

70002399 - 70032549

30151