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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7013717_7017644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7013717 - 7017644

Intron Length:

3928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTAGAC

5'SS Class:

major

3'SS Sequence:

TCTCCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAG

U12 Branch Point Sequence:

AGTGGTACATCT

Flanking Amino Acid:

RKGSRVPSKEDDKEIDLEHL

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

34.1

Major BPS

49.8

-0

1.6

49.1

46.3

Major PPT

80.1

0.68

0.7

72.7

32.1

Minor 5ss

36.9

-1.5

3.3

46.6

Minor BPS

35.7

-1

2.1

51.98

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044192

6801207 - 7018067

216861

ENSAPLT00000005363

6890404 - 7018067

127664