Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_70293793_70294463_R

Intron Information:

Intron Rank:

143636

Intron Class:

major

Intron Phase:

Intron Coordinates:

70293793 - 70294463

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATATTCATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

80.7

33.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

79.1

0.66

0.9

73.4

37.1

Minor 5ss

38.7

-1.3

2.8

47.9

41.8

Minor BPS

50.7

0.1

1.8

71.84

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029619

70293439 - 70301911

8473