Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_70294605_70298804_R

Intron Information:

Intron Rank:

143634

Intron Class:

major

Intron Phase:

Intron Coordinates:

70294605 - 70298804

Intron Length:

4200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTCCTATTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.61

0.9

70.4

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

59.3

0.27

1.6

68.42

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028109

70289552 - 70306290

16739

ENSAPLT00000032717

70289552 - 70301911

12360

ENSAPLT00000029619

70293439 - 70301911

8473