Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_70467139_70470053_R

Intron Information:

Intron Rank:

152000

Intron Class:

major

Intron Phase:

Intron Coordinates:

70467139 - 70470053

Intron Length:

2915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGATT

5'SS Class:

major

3'SS Sequence:

CTCTTGCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

AGTTATATGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

32.7

Major BPS

75.8

0.64

65.8

Major PPT

66.7

0.38

62.1

37.8

Minor 5ss

32.1

-2

3.4

47.8

47.9

Minor BPS

48.2

-0

1.7

67.87

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027163

70466831 - 70470173

3343