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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7120672_7123451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7120672 - 7123451

Intron Length:

2780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ACTATCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAT

U12 Branch Point Sequence:

GTGCCATGAAAT

Flanking Amino Acid:

SPASGGAQGAGIFLLFPEQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

58.4

0.21

1.2

38.7

Major PPT

80.9

0.69

0.9

77.3

36.2

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

-0

1.8

66.49

42.9

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027477

7120476 - 7162082

41607