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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7123509_7129242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7123509 - 7129242

Intron Length:

5734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATGGCTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTTCTCTCATCT

Flanking Amino Acid:

ASTAGSFSTLGYSSVPETPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

88.7

25.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

67.9

0.4

1.1

61.2

44.1

Minor 5ss

43.5

-0.7

2.6

59.2

45.4

Minor BPS

58.8

0.35

1.8

81.56

39.8

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027477

7120476 - 7162082

41607