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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7127070_7129242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7127070 - 7129242

Intron Length:

2173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

ATGGCTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTTCTCTCATCT

Flanking Amino Acid:

AMNVGWVTAAGYSSVPETPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

67.9

0.4

1.1

61.2

44.1

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

58.8

0.35

1.8

81.56

39.8

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004820

7126934 - 7162164

35231