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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7135141_7138550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7135141 - 7138550

Intron Length:

3410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TCCTTTTTAAAG

Flanking Amino Acid:

IAAGLKFSDEATFRKRKLED

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

67.7

0.44

38.9

Major PPT

79.7

0.67

81.4

27.9

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

59.5

0.16

1.5

59.29

43.1

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231