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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7141086_7142611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7141086 - 7142611

Intron Length:

1526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGACA

5'SS Class:

strong_major

3'SS Sequence:

ACCACACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TATGTGTTGACT

Flanking Amino Acid:

ALRVFAEDGEGVEFPSKSEV

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.7

35.1

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

0.23

0.9

51.8

32.1

Minor 5ss

31.9

-2.1

3.1

40.7

45.3

Minor BPS

51.9

0.14

2.2

75.11

42.1

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231