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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7151069_7152216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7151069 - 7152216

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTGTTTAAAT

Flanking Amino Acid:

GLNGILADEMGLGKTIQAIA

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.7

77.9

30.9

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

69.5

0.69

1.8

88.96

35.8

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231