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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7154271_7154961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7154271 - 7154961

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATGATGAATT

Flanking Amino Acid:

KVVDFNVIVTTYNCAISSSD

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.8

0.6

36.8

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

49.7

0.05

2.1

75.16

41.4

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231