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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7155098_7156036_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7155098 - 7156036

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGGAC

5'SS Class:

major

3'SS Sequence:

TTTGGATGAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTTCTTATTA

Flanking Amino Acid:

VRYQHLMTINAKNRLLLTGT

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

69.5

35.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

59.9

0.22

1.1

55.4

43.8

Minor 5ss

31.9

-2.1

3.6

45.2

43.4

Minor BPS

67.3

0.54

1.5

75.49

36.2

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231