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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7156175_7156452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7156175 - 7156452

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

AATATTTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

AATTTCACAATG

Flanking Amino Acid:

EIRRMFSSKTKSAEEQSIYE

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

76.9

0.61

0.9

74.4

40.3

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

48.1

-0.2

1.8

56.12

39.2

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231