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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7157764_7158875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7157764 - 7158875

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTTCCCTTCATT

Flanking Amino Acid:

LRTMSTLMLKEPTHCDANPD

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

0.62

1.1

77.2

Major PPT

77.5

0.62

0.9

74.3

35.3

Minor 5ss

30.1

-2.3

3.2

38.9

46.2

Minor BPS

72.1

0.78

1.7

89.41

35.2

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000027477

7120476 - 7162082

41607

ENSAPLT00000004820

7126934 - 7162164

35231