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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7161820_7162102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7161820 - 7162102

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATCC

Flanking Amino Acid:

LEQDMTAADSGEEGTIPADI

Intron Amino Acid Position:

981

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.2

0.86

0.7

85.9

28.3

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

60.1

0.3

1.6

67.69

38.4

Associated Gene:

Gene:

SMARCAD1

Ensembl Gene ID:

ENSAPLG00000004630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028644

7120476 - 7162657

42182

ENSAPLT00000004820

7126934 - 7162164

35231