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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7164771_7167873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7164771 - 7167873

Intron Length:

3103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TACCCACTGACG

Flanking Amino Acid:

PWAEKNQEVKQQAFNDILTN

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

70.6

35.2

Major BPS

61.3

0.28

52.7

34.2

Major PPT

79.8

0.67

0.8

77.5

31.3

Minor 5ss

-1.9

3.1

39.6

Minor BPS

-0.5

51.49

42.3

Associated Gene:

Gene:

HPGDS

Ensembl Gene ID:

ENSAPLG00000004536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045890

7163307 - 7190019

26713

ENSAPLT00000004679

7156072 - 7190019

33948