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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7169520_7178358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7169520 - 7178358

Intron Length:

8839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

EAADWPKIKPTIPFGKIPIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.4

0.42

33.1

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

HPGDS

Ensembl Gene ID:

ENSAPLG00000004536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045890

7163307 - 7190019

26713

ENSAPLT00000004679

7156072 - 7190019

33948