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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7178493_7188780_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7178493 - 7188780

Intron Length:

10288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TCTAAAGTAACC

Flanking Amino Acid:

PRKRPHSTAPKMPHYKLTYF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

27.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

73.4

0.53

71.2

33.4

Minor 5ss

39.1

-1.2

2.9

50.9

39.6

Minor BPS

44.5

-0.4

2.3

61.34

43.5

Associated Gene:

Gene:

HPGDS

Ensembl Gene ID:

ENSAPLG00000004536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045890

7163307 - 7190019

26713

ENSAPLT00000004679

7156072 - 7190019

33948