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Intron Name: Anas_platyrhynchos_platyrhynchos_4_71835897_71933489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

71835897 - 71933489

Intron Length:

97593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GAATTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TCTTTCTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

70.5

0.46

67.4

43.1

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

72.1

0.77

1.3

84.15

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029048

71835745 - 72082468

246724