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Intron Name: Anas_platyrhynchos_platyrhynchos_4_71948503_72081232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71948503 - 72081232

Intron Length:

132730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

EHENKSDSENGPPMPSSSSS

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.2

0.77

0.7

80.6

30.8

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029048

71835745 - 72082468

246724

ENSAPLT00000017138

71873912 - 72082468

208557