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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7209471_7210409_F

Intron Information:

Intron Rank:

124926

Intron Class:

major

Intron Phase:

Intron Coordinates:

7209471 - 7210409

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACTTA

5'SS Class:

major

3'SS Sequence:

GCTTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AAGTCAGAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

68.5

39.2

Major BPS

0.1

59.7

32.6

Major PPT

86.7

0.83

0.7

84.6

30.3

Minor 5ss

45.7

-0.5

3.2

64.5

46.9

Minor BPS

38.9

-0.8

2.3

49.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041755

7208822 - 7212324

3503

ENSAPLT00000029817

7206874 - 7217718

10845