Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_7210500_7217584_F

Intron Information:

Intron Rank:

124927

Intron Class:

major

Intron Phase:

Intron Coordinates:

7210500 - 7217584

Intron Length:

7085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

CTGTCCAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTGTCCAAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

41.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

61.2

0.25

55.9

37.9

Minor 5ss

39.3

-1.2

3.1

52.3

44.6

Minor BPS

53.5

0.11

67.91

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029817

7206874 - 7217718

10845