Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72172796_72188190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72172796 - 72188190

Intron Length:

15395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

TCTGTTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TCTGTTTCAACA

Flanking Amino Acid:

QGWNGEHCTIEGCPGLCNSN

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

53.3

46.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.4

0.62

0.9

73.4

35.9

Minor 5ss

-0.9

3.2

52.2

46.9

Minor BPS

0.18

1.6

66.33

40.9

Associated Gene:

Gene:

TENM3

Ensembl Gene ID:

ENSAPLG00000016426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017151

72167630 - 72248546

80917

ENSAPLT00000048241

72167630 - 72248546

80917