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Intron Name: Anas_platyrhynchos_platyrhynchos_4_72214258_72214648_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
72214258 - 72214648

Intron Length:
391

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATATG

5'SS Class:
strong_major

3'SS Sequence:
CTCTTCACTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TAATTTTTATCC

Flanking Amino Acid:
AVEATLMSPKGIAIDKNGLI

Intron Amino Acid Position:
773

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.1
0.9
0.9
84.2
33.9

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
68.2
0.41
1
68.6
30.6

Minor 5ss
38.7
-1.3
2.9
50.6
45.9

Minor BPS
60.5
0.31
1.5
67.78
37.8

Associated Gene:

Gene:
TENM3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72167630 - 72248546
80917

72167630 - 72248546
80917