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Intron Name: Anas_platyrhynchos_platyrhynchos_4_72214804_72215652_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
72214804 - 72215652

Intron Length:
849

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACACATT

5'SS Class:
major

3'SS Sequence:
TCTCTTTGTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAGTAAA

U12 Branch Point Sequence:
CACTAGTGAACT

Flanking Amino Acid:
TCDTSMHISQVRLEWPTDLA

Intron Amino Acid Position:
825

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.57
1.1
75.3
40.7

Major BPS
67.4
0.43
1.1
67.9
36.3

Major PPT
72.9
0.52
1.1
78.5
33.7

Minor 5ss
43.6
-0.7
3.3
66.1
45

Minor BPS
45.1
-0.2
2.3
62.88
46.6

Associated Gene:

Gene:
TENM3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72167630 - 72248546
80917

72167630 - 72248546
80917