Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72336340_72337896_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

72336340 - 72337896

Intron Length:

1557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGGC

5'SS Class:

major

3'SS Sequence:

CATGGACCCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTCTCATGGACC

Flanking Amino Acid:

DWSRRATRSQGKMPGNMKKP

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

40.8

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

55.3

0.12

0.9

44.3

37.6

Minor 5ss

27.8

-2.5

3.7

41.2

45.5

Minor BPS

50.5

-0

1.8

63.67

Associated Gene:

Gene:

ZNF638

Ensembl Gene ID:

ENSAPLG00000019837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024789

72325928 - 72361973

36046

ENSAPLT00000022648

72325928 - 72363365

37438