Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72339743_72340045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72339743 - 72340045

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

GATGCAATAAAA

Flanking Amino Acid:

AEKPKASPGQAKMSIKKKTR

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

72.1

0.5

0.9

69.8

36.7

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

45.2

-0.3

57.45

40.8

Associated Gene:

Gene:

ZNF638

Ensembl Gene ID:

ENSAPLG00000019837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022648

72325928 - 72363365

37438

ENSAPLT00000024789

72325928 - 72361973

36046