About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72342415_72342506_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
72342415 - 72342506

Intron Length:
92

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAATTCTG

5'SS Class:
strong_major

3'SS Sequence:
AAATGTTTTGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
GTATCTTAAAAT

Flanking Amino Acid:
KGIDNPASLLEKLAEMPQVA

Intron Amino Acid Position:
964

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.5
0.81
1
74.6
41.7

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
69.3
0.43
1
62.8
43.1

Minor 5ss
37.9
-1.4
3
50.1
46.1

Minor BPS
58.3
0.34
1.8
74.88
41.6

Associated Gene:

Gene:
ZNF638

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72325928 - 72361973
36046

72325928 - 72363365
37438