Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72342579_72343377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72342579 - 72343377

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTTTTAATA

Flanking Amino Acid:

DEIKEPLTDQEAAVATVKSE

Intron Amino Acid Position:

988

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.2

0.68

0.9

77.9

34.9

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

77.2

0.85

79.7

29.8

Associated Gene:

Gene:

ZNF638

Ensembl Gene ID:

ENSAPLG00000019837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024789

72325928 - 72361973

36046

ENSAPLT00000022648

72325928 - 72363365

37438