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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7237110_7238254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7237110 - 7238254

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

CTCCCTGTAATG

Flanking Amino Acid:

YACVTLIAWAGRGNTLTPYS

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

76.8

0.67

40.9

Major PPT

81.1

0.7

0.8

80.2

31.9

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

46.9

-0.3

2.1

51.64

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024565

7223243 - 7253134

29892

ENSAPLT00000048099

7224347 - 7253134

28788