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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7238363_7243078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7238363 - 7243078

Intron Length:

4716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAA

5'SS Class:

major

3'SS Sequence:

TATTTTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTTTCTTCTACT

Flanking Amino Acid:

IIYAIIHPRYRKTIHNAVPC

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.4

36.8

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

87.9

0.85

0.7

85.9

28.3

Minor 5ss

34.3

-1.8

3.5

46.3

Minor BPS

66.3

0.59

1.9

88.46

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024565

7223243 - 7253134

29892

ENSAPLT00000048099

7224347 - 7253134

28788